Ontology list
Cellular componentgolgi apparatus - GO:0005794; protein complex - GO:0043234; mitochondrion-derived vesicle - GO:0099073; Parkin-FBXW7-Cul1 ubiquitin ligase complex - GO:1990452; catalytic complex - GO:1902494; cell projection - GO:0042995; Golgi apparatus - GO:0005794; mitochondrion - GO:0005739; cytoplasm - GO:0005737; cullin-ring ubiquitin ligase complex - GO:0031461; nucleus - GO:0005634; intracellular organelle - GO:0043229; membrane-bounded organelle - GO:0043227; cell part - GO:0044464; SCF ubiquitin ligase complex - GO:0019005; intracellular membrane-bounded organelle - GO:0043231; perinuclear region of cytoplasm - GO:0048471; cytosol - GO:0005829; inclusion body - GO:0016234; ubiquitin ligase complex - GO:0000151; cellular_component - GO:0005575; endoplasmic reticulum - GO:0005783; organelle - GO:0043226; intracellular part - GO:0044424; scf ubiquitin ligase complex - GO:0019005; transferase complex - GO:1990234; Lewy body - GO:0097413; nuclear speck - GO:0016607; cytoplasmic part - GO:0044444; neuron part - GO:0097458; presynapse - GO:0098793; macromolecular complex - GO:0032991; lewy body - GO:0097413; neuron projection - GO:0043005; lubac complex - GO:0071797; aggresome - GO:0016235; parkin-fbxw7-cul1 ubiquitin ligase complex - GO:1990452;
Molecular functionprotein kinase binding - GO:0019901; ubiquitin binding - GO:0043130; Hsp70 protein binding - GO:0030544; molecular_function - GO:0003674; pdz domain binding - GO:0030165; identical protein binding - GO:0042802; ubiquitin-specific protease binding - GO:1990381; protein domain specific binding - GO:0019904; kinase binding - GO:0019900; ubiquitin-like protein conjugating enzyme binding - GO:0044390; actin binding - GO:0003779; cation binding - GO:0043169; ubiquitin-protein transferase activity - GO:0004842; f-box domain binding - GO:1990444; transferase activity - GO:0016740; cytoskeletal protein binding - GO:0008092; ion binding - GO:0043167; catalytic activity - GO:0003824; transition metal ion binding - GO:0046914; heat shock protein binding - GO:0031072; phospholipase binding - GO:0043274; macromolecular complex binding - GO:0044877; receptor binding - GO:0005102; zinc ion binding - GO:0008270; ubiquitin conjugating enzyme binding - GO:0031624; protease binding - GO:0002020; sh3 domain binding - GO:0017124; g-protein coupled receptor binding - GO:0001664; transcription regulatory region sequence-specific DNA binding - GO:0000976; PDZ domain binding - GO:0030165; beta-catenin binding - GO:0008013; hsp70 protein binding - GO:0030544; metal ion binding - GO:0046872; F-box domain binding - GO:1990444; ubiquitin-like protein binding - GO:0032182; G-protein coupled receptor binding - GO:0001664; binding - GO:0005488; transcriptional repressor activity; RNA polymerase II transcription regulatory region sequence-specific binding - GO:0001227; cullin family protein binding - GO:0097602; ligase activity - GO:0016874; ubiquitin-like protein transferase activity - GO:0019787; chaperone binding - GO:0051087; ubiquitin-like protein ligase activity - GO:0061659; ubiquitin-like protein ligase binding - GO:0044389; enzyme binding - GO:0019899; ubiquitin protein ligase binding - GO:0031625; histone deacetylase binding - GO:0042826; protein binding - GO:0005515; SH3 domain binding - GO:0017124; tubulin binding - GO:0015631; ubiquitin protein ligase activity - GO:0061630;
Biological processorganic substance metabolic process - GO:0071704; response to endoplasmic reticulum stress - GO:0034976; regulation of establishment of protein localization - GO:0070201; cell communication - GO:0007154; positive regulation of transcription from rna polymerase ii promoter - GO:0045944; positive regulation of protein ubiquitination - GO:0031398; regulation of transcription; dna-templated - GO:0006355; protein localization to mitochondrion - GO:0070585; phenol-containing compound metabolic process - GO:0018958; response to metal ion - GO:0010038; positive regulation of intracellular signal transduction - GO:1902533; regulation of rna biosynthetic process - GO:2001141; regulation of autophagy - GO:0010506; regulation of protein targeting to mitochondrion - GO:1903214; regulation of cellular response to stress - GO:0080135; modification of morphology or physiology of other organism involved in symbiotic interaction - GO:0051817; regulation of stress-activated mapk cascade - GO:0032872; catecholamine metabolic process - GO:0006584; regulation of nucleobase-containing compound metabolic process - GO:0019219; regulation of i-kappab kinase/nf-kappab signaling - GO:0043122; organonitrogen compound metabolic process - GO:1901564; positive regulation of cellular component organization - GO:0051130; regulation of transport - GO:0051049; inorganic anion transport - GO:0015698; transport - GO:0006810; positive regulation of cellular response to oxidative stress - GO:1900409; mitochondrial fission - GO:0000266; positive regulation of response to cytokine stimulus - GO:0060760; negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway - GO:1903377; regulation of kinase activity - GO:0043549; single-organism localization - GO:1902578; positive regulation of molecular function - GO:0044093; cellular protein modification process - GO:0006464; positive regulation of cellular protein catabolic process - GO:1903364; response to chemical - GO:0042221; regulation of amine transport - GO:0051952; regulation of response to cytokine stimulus - GO:0060759; regulation of cytoskeleton organization - GO:0051493; protein ubiquitination - GO:0016567; cellular process - GO:0009987; positive regulation of proteolysis - GO:0045862; negative regulation of cell communication - GO:0010648; negative regulation of response to endoplasmic reticulum stress - GO:1903573; mitochondrion degradation - GO:0000422; dopamine uptake - GO:0090494; protein K6-linked ubiquitination - GO:0085020; metal ion homeostasis - GO:0055065; positive regulation of rna metabolic process - GO:0051254; cellular aromatic compound metabolic process - GO:0006725; organic substance biosynthetic process - GO:1901576; regulation of mitochondrial fission - GO:0090140; organic hydroxy compound transport - GO:0015850; regulation of programmed cell death - GO:0043067; transcription; dna-templated - GO:0006351; proteolysis - GO:0006508; regulation of peptide secretion - GO:0002791; modulation by host of viral genome replication - GO:0044827; protein ubiquitination involved in ubiquitin-dependent protein catabolic process - GO:0042787; regulation of phosphorylation - GO:0042325; negative regulation of mapk cascade - GO:0043409; catecholamine uptake involved in synaptic transmission - GO:0051934; ubiquitin-dependent protein catabolic process - GO:0006511; negative regulation of cytoskeleton organization - GO:0051494; positive regulation of proteasomal protein catabolic process - GO:1901800; response to transition metal nanoparticle - GO:1990267; positive regulation of proteasomal ubiquitin-dependent protein catabolic process - GO:0032436; negative regulation of signal transduction - GO:0009968; positive regulation of protein polyubiquitination - GO:1902916; synaptic transmission - GO:0007268; establishment of localization - GO:0051234; regulation of mitochondrion organization - GO:0010821; regulation of proteasomal protein catabolic process - GO:0061136; dopamine metabolic process - GO:0042417; modulation by host of viral process - GO:0044788; regulation of phosphate metabolic process - GO:0019220; response to organic cyclic compound - GO:0014070; negative regulation of spontaneous neurotransmitter secretion - GO:1904049; negative regulation of glucokinase activity - GO:0033132; positive regulation of retrograde transport; endosome to Golgi - GO:1905281; negative regulation of molecular function - GO:0044092; negative regulation of gene expression - GO:0010629; protein modification by small protein conjugation - GO:0032446; regulation of cellular component organization - GO:0051128; regulation of cellular protein metabolic process - GO:0032268; cellular response to inorganic substance - GO:0071241; cellular macromolecule metabolic process - GO:0044260; developmental process - GO:0032502; regulation of cellular localization - GO:0060341; dopamine transport - GO:0015872; modification of morphology or physiology of other organism - GO:0035821; negative regulation of reactive oxygen species metabolic process - GO:2000378; negative regulation of peptide secretion - GO:0002792; monovalent inorganic cation transport - GO:0015672; regulation of protein modification by small protein conjugation or removal - GO:1903320; response to stimulus - GO:0050896; regulation of neurotransmitter transport - GO:0051588; regulation of vesicle-mediated transport - GO:0060627; regulation of stress-activated protein kinase signaling cascade - GO:0070302; regulation of anatomical structure morphogenesis - GO:0022603; positive regulation of programmed cell death - GO:0043068; cellular response to topologically incorrect protein - GO:0035967; ion homeostasis - GO:0050801; regulation of cellular protein localization - GO:1903827; response to topologically incorrect protein - GO:0035966; heterocycle metabolic process - GO:0046483; catecholamine uptake - GO:0090493; regulation of secretion by cell - GO:1903530; regulation of biological process - GO:0050789; protein metabolic process - GO:0019538; behavior - GO:0007610; positive regulation of cellular catabolic process - GO:0031331; ion transport - GO:0006811; cellular response to stimulus - GO:0051716; negative regulation of hormone secretion - GO:0046888; modification by host of symbiont morphology or physiology - GO:0051851; signaling - GO:0023052; response to nitrogen compound - GO:1901698; regulation of cellular carbohydrate metabolic process - GO:0010675; organic cyclic compound metabolic process - GO:1901360; cation transport - GO:0006812; positive regulation of I-kappaB kinase/NF-kappaB signaling - GO:0043123; negative regulation of viral process - GO:0048525; mitophagy - GO:0000422; cellular response to toxic substance - GO:0097237; regulation of actin filament bundle assembly - GO:0032231; regulation of intrinsic apoptotic signaling pathway - GO:2001242; response to oxygen-containing compound - GO:1901700; negative regulation of developmental process - GO:0051093; negative regulation of intrinsic apoptotic signaling pathway - GO:2001243; regulation of hormone secretion - GO:0046883; response to organonitrogen compound - GO:0010243; regulation of transcription from rna polymerase ii promoter - GO:0006357; negative regulation of transport - GO:0051051; regulation of cell death - GO:0010941; nucleic acid metabolic process - GO:0090304; metabolic process - GO:0008152; aromatic compound biosynthetic process - GO:0019438; nucleic acid-templated transcription - GO:0097659; cellular response to unfolded protein - GO:0034620; cellular macromolecule catabolic process - GO:0044265; negative regulation of secretion - GO:0051048; organelle organization - GO:0006996; positive regulation of oxidative stress-induced neuron death - GO:1903223; regulation of glucokinase activity - GO:0033131; mitochondrion to lysosome transport - GO:0099074; cellular response to metal ion - GO:0071248; regulation of gene expression - GO:0010468; cellular response to catecholamine stimulus - GO:0071870; adult behavior - GO:0030534; single-organism behavior - GO:0044708; organic cyclic compound biosynthetic process - GO:1901362; regulation of establishment of protein localization to mitochondrion - GO:1903747; negative regulation of insulin secretion - GO:0046676; negative regulation of oxidative stress-induced cell death - GO:1903202; protein catabolic process - GO:0030163; regulation of proteasomal ubiquitin-dependent protein catabolic process - GO:0032434; protein deubiquitination - GO:0016579; regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway - GO:1902235; protein monoubiquitination - GO:0006513; positive regulation of transcription; dna-templated - GO:0045893; regulation of anion transport - GO:0044070; regulation of oxidative stress-induced cell death - GO:1903201; modification-dependent protein catabolic process - GO:0019941; regulation of macromolecule biosynthetic process - GO:0010556; cellular metabolic process - GO:0044237; regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway - GO:1903381; negative regulation of protein modification process - GO:0031400; synaptic transmission; glutamatergic - GO:0035249; positive regulation of signaling - GO:0023056; regulation of mapk cascade - GO:0043408; regulation of cellular process - GO:0050794; response to unfolded protein - GO:0006986; regulation of protein linear polyubiquitination - GO:1902528; regulation of insulin secretion - GO:0050796; regulation of macromolecule metabolic process - GO:0060255; positive regulation of signal transduction - GO:0009967; negative regulation of oxidative stress-induced neuron death - GO:1903204; regulation of neuron apoptotic process - GO:0043523; regulation of response to stimulus - GO:0048583; positive regulation of cellular process - GO:0048522; macromolecule modification - GO:0043412; organic substance transport - GO:0071702; cellular response to organic cyclic compound - GO:0071407; positive regulation of gene expression - GO:0010628; neuron cellular homeostasis - GO:0070050; regulation of lipid transport - GO:0032368; regulation of secretion - GO:0051046; cellular component organization or biogenesis - GO:0071840; negative regulation of intralumenal vesicle formation - GO:1905366; negative regulation of peptide hormone secretion - GO:0090278; regulation of reactive oxygen species metabolic process - GO:2000377; protein k6-linked ubiquitination - GO:0085020; cellular response to dopamine - GO:1903351; regulation of nucleic acid-templated transcription - GO:1903506; primary metabolic process - GO:0044238; regulation of organelle organization - GO:0033043; protein K29-linked ubiquitination - GO:0035519; positive regulation of i-kappab kinase/nf-kappab signaling - GO:0043123; nitrogen compound metabolic process - GO:0006807; rna biosynthetic process - GO:0032774; protein K11-linked ubiquitination - GO:0070979; regulation of protein catabolic process - GO:0042176; regulation of canonical Wnt signaling pathway - GO:0060828; positive regulation of biological process - GO:0048518; multi-organism process - GO:0051704; proteolysis involved in cellular protein catabolic process - GO:0051603; single organism signaling - GO:0044700; regulation of protein phosphorylation - GO:0001932; regulation of protein transport - GO:0051223; regulation of protein localization - GO:0032880; inorganic ion homeostasis - GO:0098771; cell-cell signaling - GO:0007267; regulation of cell communication - GO:0010646; cellular response to stress - GO:0033554; positive regulation of mitophagy - GO:1903599; cellular response to organic substance - GO:0071310; positive regulation of transcription from RNA polymerase II promoter - GO:0045944; central nervous system development - GO:0007417; protein localization to organelle - GO:0033365; anion transport - GO:0006820; regulation of rna metabolic process - GO:0051252; regulation of intracellular transport - GO:0032386; regulation of dopamine metabolic process - GO:0042053; protein k11-linked ubiquitination - GO:0070979; negative regulation of response to stimulus - GO:0048585; organic substance catabolic process - GO:1901575; chemical homeostasis - GO:0048878; neurotransmitter uptake - GO:0001504; negative regulation of cellular component organization - GO:0051129; regulation of multi-organism process - GO:0043900; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway - GO:1902236; negative regulation of viral genome replication - GO:0045071; cellular protein localization - GO:0034613; positive regulation of protein modification by small protein conjugation or removal - GO:1903322; regulation of signaling - GO:0023051; catechol-containing compound metabolic process - GO:0009712; regulation of biosynthetic process - GO:0009889; regulation of localization - GO:0032879; regulation of viral genome replication - GO:0045069; negative regulation of transcription from RNA polymerase II promoter - GO:0000122; dopamine uptake involved in synaptic transmission - GO:0051583; cation homeostasis - GO:0055080; negative regulation of protein transport - GO:0051224; negative regulation of hexokinase activity - GO:1903300; positive regulation of binding - GO:0051099; positive regulation of nucleic acid-templated transcription - GO:1903508; negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway - GO:1902176; biosynthetic process - GO:0009058; negative regulation of carbohydrate metabolic process - GO:0045912; negative regulation of signaling - GO:0023057; negative regulation of organelle organization - GO:0010639; regulation of actin filament-based process - GO:0032970; negative regulation of mitochondrial fusion - GO:0010637; regulation of cellular metabolic process - GO:0031323; positive regulation of intrinsic apoptotic signaling pathway - GO:2001244; positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway - GO:1903378; regulation of mitochondrial membrane potential - GO:0051881; positive regulation of metabolic process - GO:0009893; positive regulation of DNA binding - GO:0043388; regulation of dopamine secretion - GO:0014059; positive regulation of protein linear polyubiquitination - GO:1902530; mitochondrion organization - GO:0007005; regulation of protein targeting - GO:1903533; aggresome assembly - GO:0070842; regulation of protein stability - GO:0031647; regulation of symbiosis; encompassing mutualism through parasitism - GO:0043903; single-organism metabolic process - GO:0044710; single-multicellular organism process - GO:0044707; modification-dependent macromolecule catabolic process - GO:0043632; cellular component assembly - GO:0022607; system process - GO:0003008; cellular nitrogen compound biosynthetic process - GO:0044271; cognition - GO:0050890; macromitophagy - GO:0000423; negative regulation of secretion by cell - GO:1903531; biological_process - GO:0008150; positive regulation of cellular biosynthetic process - GO:0031328; regulation of catecholamine secretion - GO:0050433; regulation of cellular protein catabolic process - GO:1903362; cellular response to monoamine stimulus - GO:0071868; positive regulation of nitrogen compound metabolic process - GO:0051173; regulation of response to oxidative stress - GO:1902882; positive regulation of macromolecule biosynthetic process - GO:0010557; positive regulation of mitochondrial fusion - GO:0010636; response to organic substance - GO:0010033; cellular nitrogen compound metabolic process - GO:0034641; positive regulation of cellular metabolic process - GO:0031325; cellular response to chemical stimulus - GO:0070887; regulation of glucose metabolic process - GO:0010906; parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization - GO:0061734; regulation of cytokine-mediated signaling pathway - GO:0001959; protein k29-linked ubiquitination - GO:0035519; positive regulation of cellular protein metabolic process - GO:0032270; positive regulation of protein metabolic process - GO:0051247; regulation of hexokinase activity - GO:1903299; cellular protein metabolic process - GO:0044267; negative regulation of protein metabolic process - GO:0051248; regulation of binding - GO:0051098; negative regulation of biological process - GO:0048519; zinc ion homeostasis - GO:0055069; regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway - GO:1903376; cellular response to manganese ion - GO:0071287; positive regulation of oxidative stress-induced cell death - GO:1903209; negative regulation of metabolic process - GO:0009892; negative regulation of actin filament bundle assembly - GO:0032232; negative regulation of stress-activated mapk cascade - GO:0032873; cellular response to nitrogen compound - GO:1901699; regulation of synaptic vesicle transport - GO:1902803; protein modification process - GO:0036211; cellular component organization - GO:0016043; negative regulation of neuron death - GO:1901215; negative regulation of cellular protein metabolic process - GO:0032269; regulation of intracellular signal transduction - GO:1902531; protein K27-linked ubiquitination - GO:0044314; negative regulation of macromolecule metabolic process - GO:0010605; protein autoubiquitination - GO:0051865; homeostatic process - GO:0042592; regulation of cellular macromolecule biosynthetic process - GO:2000112; positive regulation of dendrite extension - GO:1903861; positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway - GO:1902177; positive regulation of macromitophagy in response to mitochondrial depolarization - GO:0098779; cellular biosynthetic process - GO:0044249; cellular response to ammonium ion - GO:0071242; positive regulation of protein catabolic process - GO:0045732; regulation of actin cytoskeleton organization - GO:0032956; biological regulation - GO:0065007; positive regulation of neuron apoptotic process - GO:0043525; response to external stimulus - GO:0009605; negative regulation of cellular metabolic process - GO:0031324; response to endogenous stimulus - GO:0009719; negative regulation of multi-organism process - GO:0043901; single-organism cellular process - GO:0044763; nucleobase-containing compound biosynthetic process - GO:0034654; divalent inorganic cation homeostasis - GO:0072507; organelle disassembly - GO:1903008; cellular homeostasis - GO:0019725; positive regulation of cytokine-mediated signaling pathway - GO:0001961; negative regulation of cell death - GO:0060548; regulation of signal transduction - GO:0009966; transition metal ion homeostasis - GO:0055076; positive regulation of protein localization to membrane - GO:1905477; regulation of synaptic transmission - GO:0050804; regulation of oxidative stress-induced neuron death - GO:1903203; negative regulation of cellular response to oxidative stress - GO:1900408; negative regulation by host of viral process - GO:0044793; cellular macromolecule localization - GO:0070727; interaction with symbiont - GO:0051702; ERAD pathway - GO:0036503; response to manganese ion - GO:0010042; cellular response to organonitrogen compound - GO:0071417; negative regulation of mitochondrion organization - GO:0010823; regulation of molecular function - GO:0065009; organelle fission - GO:0048285; regulation of mitochondrial fusion - GO:0010635; norepinephrine metabolic process - GO:0042415; anatomical structure homeostasis - GO:0060249; negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway - GO:1903382; cellular catabolic process - GO:0044248; regulation of apoptotic process - GO:0042981; negative regulation of transferase activity - GO:0051348; positive regulation of response to oxidative stress - GO:1902884; positive regulation of apoptotic signaling pathway - GO:2001235; single-organism transport - GO:0044765; locomotory behavior - GO:0007626; regulation of intracellular protein transport - GO:0033157; cellular protein catabolic process - GO:0044257; interspecies interaction between organisms - GO:0044419; protein polyubiquitination - GO:0000209; protein modification by small protein conjugation or removal - GO:0070647; positive regulation of nucleobase-containing compound metabolic process - GO:0045935; regulation of release of cytochrome c from mitochondria - GO:0090199; regulation of neurotransmitter levels - GO:0001505; response to stress - GO:0006950; positive regulation of neuron death - GO:1901216; rna metabolic process - GO:0016070; neurological system process - GO:0050877; regulation of neuron death - GO:1901214; response to dopamine - GO:1903350; response to monoamine - GO:0071867; positive regulation of protein binding - GO:0032092; negative regulation of cellular carbohydrate metabolic process - GO:0010677; regulation of response to stress - GO:0080134; regulation of cellular component biogenesis - GO:0044087; ammonium transport - GO:0015696; negative regulation of JNK cascade - GO:0046329; regulation of protein modification process - GO:0031399; learning - GO:0007612; macromolecule localization - GO:0033036; regulation of cellular biosynthetic process - GO:0031326; regulation of apoptotic signaling pathway - GO:2001233; regulation of protein secretion - GO:0050708; regulation of nitrogen compound metabolic process - GO:0051171; positive regulation of organelle organization - GO:0010638; regulation of mitochondrion degradation - GO:1903146; system development - GO:0048731; macroautophagy - GO:0016236; regulation of primary metabolic process - GO:0080090; negative regulation of programmed cell death - GO:0043069; learning or memory - GO:0007611; regulation of protein polyubiquitination - GO:1902914; nucleobase-containing compound metabolic process - GO:0006139; positive regulation of tumor necrosis factor-mediated signaling pathway - GO:1903265; negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator - GO:1902254; heterocycle biosynthetic process - GO:0018130; positive regulation of neurotransmitter uptake - GO:0051582; positive regulation of response to stimulus - GO:0048584; positive regulation of biosynthetic process - GO:0009891; single-organism catabolic process - GO:0044712; positive regulation of apoptotic process - GO:0043065; response to catecholamine - GO:0071869; response to toxic substance - GO:0009636; negative regulation of neuron apoptotic process - GO:0043524; negative regulation of canonical Wnt signaling pathway - GO:0090090; protein k63-linked ubiquitination - GO:0070534; regulation of carbohydrate metabolic process - GO:0006109; positive regulation of mitochondrion organization - GO:0010822; protein localization - GO:0008104; negative regulation of protein secretion - GO:0050709; cellular response to endogenous stimulus - GO:0071495; regulation of phosphorus metabolic process - GO:0051174; macromolecule biosynthetic process - GO:0009059; protein k27-linked ubiquitination - GO:0044314; negative regulation of exosomal secretion - GO:1903542; negative regulation of response to oxidative stress - GO:1902883; macromolecule catabolic process - GO:0009057; regulation of cellular response to oxidative stress - GO:1900407; anatomical structure development - GO:0048856; negative regulation of catalytic activity - GO:0043086; regulation of biological quality - GO:0065008; localization - GO:0051179; cellular macromolecule biosynthetic process - GO:0034645; multicellular organismal process - GO:0032501; adult locomotory behavior - GO:0008344; ammonium ion metabolic process - GO:0097164; regulation of protein ubiquitination - GO:0031396; negative regulation of cellular process - GO:0048523; proteasome-mediated ubiquitin-dependent protein catabolic process - GO:0043161; negative regulation by host of viral genome replication - GO:0044828; nitrogen compound transport - GO:0071705; cellular response to oxygen-containing compound - GO:1901701; neuromuscular process - GO:0050905; positive regulation of catabolic process - GO:0009896; negative regulation of jnk cascade - GO:0046329; response to oxidative stress - GO:0006979; cellular component disassembly - GO:0022411; monoamine transport - GO:0015844; response to ammonium ion - GO:0060359; regulation of metabolic process - GO:0019222; posttranscriptional regulation of gene expression - GO:0010608; positive regulation of dna binding - GO:0043388; protein destabilization - GO:0031648; inclusion body assembly - GO:0070841; regulation of dna binding - GO:0051101; negative regulation of intracellular signal transduction - GO:1902532; negative regulation of phosphorylation - GO:0042326; protein k48-linked ubiquitination - GO:0070936; neuron-neuron synaptic transmission - GO:0007270; single-organism process - GO:0044699; regulation of peptide transport - GO:0090087; catecholamine transport - GO:0051937; positive regulation of cell death - GO:0010942; proteasomal protein catabolic process - GO:0010498; negative regulation of phosphorus metabolic process - GO:0010563; negative regulation of apoptotic signaling pathway - GO:2001234; protein stabilization - GO:0050821; free ubiquitin chain polymerization - GO:0010994; regulation of tumor necrosis factor-mediated signaling pathway - GO:0010803; regulation of jnk cascade - GO:0046328; positive regulation of rna biosynthetic process - GO:1902680; regulation of cytoplasmic transport - GO:1903649; protein K63-linked ubiquitination - GO:0070534; protein K48-linked ubiquitination - GO:0070936; positive regulation of cell communication - GO:0010647; regulation of cellular catabolic process - GO:0031329; catabolic process - GO:0009056; negative regulation of primary amine oxidase activity - GO:1902283; regulation of protein metabolic process - GO:0051246; regulation of transferase activity - GO:0051338; negative regulation of kinase activity - GO:0033673; regulation of viral process - GO:0050792; negative regulation of protein phosphorylation - GO:0001933; regulation of peptide hormone secretion - GO:0090276; positive regulation of mitochondrial fission - GO:0090141; regulation of ion transport - GO:0043269; autophagy - GO:0006914; regulation of proteolysis - GO:0030162; negative regulation of apoptotic process - GO:0043066; positive regulation of macromolecule metabolic process - GO:0010604; positive regulation of proteolysis involved in cellular protein catabolic process - GO:1903052; regulation of oxidative stress-induced intrinsic apoptotic signaling pathway - GO:1902175; positive regulation of developmental process - GO:0051094; negative regulation of stress-activated protein kinase signaling cascade - GO:0070303; regulation of proteolysis involved in cellular protein catabolic process - GO:1903050; regulation of neurotransmitter secretion - GO:0046928; cellular localization - GO:0051641; organic hydroxy compound metabolic process - GO:1901615; response to inorganic substance - GO:0010035; startle response - GO:0001964; regulation of catalytic activity - GO:0050790; negative regulation of release of cytochrome c from mitochondria - GO:0090201; positive regulation of protein modification process - GO:0031401; negative regulation of phosphate metabolic process - GO:0045936; single-organism organelle organization - GO:1902589; macromolecule metabolic process - GO:0043170; regulation of developmental process - GO:0050793; regulation of catabolic process - GO:0009894; neurotransmitter transport - GO:0006836;